Number 5 is Alive

BY Brian Fisher

September 12, 2024

SHARE THIS ARTICLE

Search

What if spiritual formation is less about information and more about transforming the hidden operating system of the heart? In this episode and article, Brian Fisher explores how unconscious ideas and desires shape our lives, why modern discipleship often fails to produce deep transformation, and how Jesus forms people through five essential elements: time, habits, community, intimacy, and instruction.


The Soul’s Operating System

We’re wrestling with The Great Omission (Dallas Willard’s term describing modern Christianity, in which we talk about making disciples but struggle to do so) and the Three Primary Problems that make spiritual formation challenging in our current age.

Willard defined a disciple as an “apprentice of Jesus” for the purpose of becoming more like Him. Over time, we increasingly think like He thinks, act like He acts, relate like He relates, and love like He loves. We become more like our King as we become the best version of ourselves.

However, this isn’t the aim or vision of many Christian institutions today. Conversion, doctrinal conformity, replication, accumulation of knowledge, and increased service are often assumed as the primary goals of modern Christianity. They have their important place, though they dance around the edges of the central focus of being “conformed to the image of Christ.”

Not only do we experience The Great Omission as we watch various nations and cultures (and a recent slew of churches) flail amid moral decline, but we may also sense it in our inner lives.

Where is this “abundant life”? Shouldn’t I have a two-way conversational prayer life with God? I’m in the midst of a crisis, but I don’t seem to be able to grasp this elusive “peace that passes all understanding.” Why can’t my soul find rest? Why do I struggle to love my enemies? Do I love more like Jesus than I did five years ago?

We sense this disconnection, this internal disintegration, and wonder if this is all there is.

There is a depth of discipleship missing from many institutions and programs. Yet, as Richard Foster wrote, “The desperate need today is not for a greater number of intelligent people, or gifted people, but for deep people.”

If the world needs deeper people, the question arises: “How are these people formed?”


The Heart’s Operating System

One way is to come together to solve the Discipleship Dilemma.

Paradoxically, the journey to become more like Jesus runs continuously through our own hearts and, thus, through our stories. Yet exploring our stories as a means of growing in Christ is often ignored or condemned as selfish or sinful. As I noted last week, this makes little sense, given that God’s home on earth (post-Pentecost) isn’t a garden, tabernacle, or temple. He makes His home in our hearts.

You are worth exploring.

We’re now moving into the recesses of the human person, rarely talked about or taught, though this is where true and lasting character formation occurs. You may find this a strange (and perhaps a bit uncomfortable) way to frame and explore discipleship, but hang in there with me.

In the last post, I suggested there are layers of our hearts that function like involuntary body systems or deeply ingrained habits. We don’t consciously tell our bodies to convert food into energy. We don’t normally force our eyes to focus on a particular object. We probably don’t have to tell ourselves to shampoo our hair in the shower. Much of our human experience occurs behind the scenes. We are powered and governed by functions and forces that rarely cross our conscious thoughts.

You’re most likely reading this on your phone or computer. My guess is you aren’t thinking about your device’s RAM, system version, hard drive space, or CPU. But if any of this essential hardware or software breaks down, our device will let us know immediately. If you want your device to function better, you have to make sure its operating system and hardware are healthy and flourishing. To “transform” your device, you need to pay attention to and work on components that are often overlooked.

So it is with the heart.

Ideas and Desires

There are at least two powerful forces at work in the “operating systems” of our souls: ideas and desires. Ideas are assumptions, principles, and conclusions that power us, and they aren’t so much intellectual statements as they are experienced realities. Sometimes they align with our stated, conscious beliefs, but many times they don’t. Our desires are those relationships, things, and experiences for which we truly and desperately long.

If we wish to have our character formed more like someone else’s, these largely unconscious ideas and desires must be formed more like theirs. If someone does the things Jesus modeled and commanded without even thinking about it, this is a sure sign their ideas and desires (their operating systems) are being renewed and redeemed.

Jesus constantly invited people to explore their “operating systems” when He walked the earth, and He still does today. His habit of turning the tables on questions asked, using confusing and sometimes obscure parables, performing surprising miracles, and offering shocking metaphors was an attempt to “awaken” or “attune” the hearts of those around Him to His ideas while becoming aware of their own.

That’s also why we’re playing with another definition of discipleship: the progressive transformation of dark ideas to light in the bedrock of our hearts.

What Factors Transform the Heart?

Positively forming a human being’s operating system involves far more than what we typically assume.

Modern Christianity often operates on the premise that instruction is the primary, if not the sole, catalyst in shaping our ideas and desires. This assumption is easy to validate – simply look at how much time, energy, focus, and attention are placed on the Sunday sermon, Bible studies, and the proliferation of Internet Bible teachings.

Yet anyone who has tried to instruct a toddler to behave properly knows this assumption is flawed. Simply telling us what is good, right, and true may or may not affect our ideas and desires. Apologetics has its place, but it is not a silver bullet.

The modern Christian spiritual formation movement rightly focuses on habits, or what’s known as spiritual disciplines. They practice many habits some of us have never heard of or attempted: lectio divina, the Ignatian exercises, silence and solitude, radical acts of generosity, scarcity, fasting, and so on. No doubt, intentionally practicing formative habits can and does impact the deep, unconscious areas of our hearts.

However, I have attempted to practice good eating and exercise habits for months on end… numerous times. Yet here I sit, a good 20 lbs over my target weight, which is where I’ve been for most of my adult life. My attempts at practicing good habits haven’t yet led to permanent changes in my body’s “operating system.”

In addition to instruction and habits, there are three other vital elements that Jesus modeled to transform dark ideas into light: time, community, and intimacy.

The optimal environment for deep, permanent spiritual formation – so that we unconsciously do the things Jesus desires of us – is one that intentionally incorporates all five elements: time, habits, community, intimacy, and instruction.

As we’ll explore down the road, you and I may or may not have access to these types of intentionally formative, five-element groups. However, it’s something easily remedied.

Practicing Awareness of Our Heart’s Operating System

Lastly, let’s expand a bit more on the first step toward transforming these hidden ideas and desires.

We’re defining deep discipleship as the progressive transformation of a heart’s operating system (our ideas and desires) from darkness to light. This journey is best accomplished when we intentionally join with Jesus and others in five-element ecosystems featuring time, habits, community, intimacy, and instruction.

Yet if these ideas and desires largely govern us from the shadows, how do we know what needs to be transformed?

By practicing awareness. Just because we primarily function from hidden ideas doesn’t mean they have to remain hidden.

I briefly noted last week that the Bible reveals every human heart sends up flares or signposts that point back down to the true ideas and desires that govern us. Scripture shares that we all have at least Eight Indicators: our thought patterns, emotions, relationships, behaviors, health, words, and how we use time and money.

By becoming increasingly aware of these Eight Indicators in ourselves and those around us, we become increasingly attuned to our operating systems. Over time, this awareness leads to deeper intimacy with Jesus and an increased capacity to love and serve others.

We’re going to continue to dig into these Indicators over the next few posts. Here are some examples of what happens when our statements of faith don’t align with the ideas and desires that govern us.

  • The Bible-teaching parents who routinely triangulate their kids and don’t know they’re doing it
  • The mom who maintains a frenetic, chaotic “Christian” life because she unconsciously functions from the idea that her value is wrapped up in her performance
  • The porn-addicted pastor who suffers from tremendous guilt and shame, having figured out how to lie to his accountability partner and bypass his porn filters, while never being guided into his own story to uncover why his operating system bends toward darkness
  • The Christian woman who blows up her close relationships every few years due to pent-up rage that she was never permitted to grieve
  • The elder who knows more Scripture than the rest of his church, yet no one approaches because of his shocking lack of self-awareness
  • The middle-aged mother who continuously serves others yet has sunk into a years-long pattern of perpetual self-talk abuse and beratement
  • The successful businessman who has experienced every level of corporate and church success yet is hounded by the sense that God doesn’t approve of him
  • The prosperous couple who have no reason to worry about money, but whose lives and behaviors reflect a couple perpetually anxious about money

Every one of these people knows the Bible, goes to church, and is considered a “mature Christian” by those around them. Yet they all suffer from the Discipleship Dilemma, and they all struggle to experience the depth of the abundant life to which Christ invites us. Their brokenness isn’t in their statements of faith – it’s in their unconscious ideas and desires that govern them, and it’s precisely where Jesus invites us to meet Him.

Duc In Altum!

Brian

Read this article on Substack.

Related article

ICON
suffering and spiritual formation

In Sickness and In Sickness

Can suffering become part of deep discipleship? Brian reflects on chronic illness, vulnerability, surrender, and the mysterious role suffering plays in spiritual formation and becoming more like Jesus.

Read more
The Great Omission

The Great Omission

**The Great Omission**

Why does modern Christianity produce so many converts—but so few deeply formed disciples? Building on the insights of Richard Foster and Dallas Willard, this piece explores the growing “Formation Gap” in the church today. While we intuitively rely on immersive, five-element environments—time, habit, community, intimacy, and instruction—to form people in every other area of life, discipleship is often reduced to scattered moments and information transfer. The result is what Willard called *The Great Omission*: a vision of faith that talks about discipleship but struggles to actually produce it. The invitation is clear—recover the kind of intentional, relational formation that shapes people into true apprentices of Jesus.

Read more
the disconnected disciple

The Disconnected Disciple

What happens when we know the Bible but feel disconnected from God and others? This episode explores the “disconnected disciple”—a believer grounded in sound doctrine but lacking deep relational and experiential formation. Drawing on the Five Elements of Formation, we examine why instruction alone cannot transform the heart, and how modern assumptions about human nature have quietly reshaped discipleship. If you’ve ever wondered why something feels missing in your spiritual life, this conversation exposes the gap—and points toward a more complete, embodied way of following Jesus.

Read more